BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F06LP1|AL425897
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1553 0.0
3x_Contig130 147 3e-35
>3x_Contig1530
Length = 6216
Score = 1553 bits (782), Expect = 0.0
Identities = 807/814 (99%), Gaps = 2/814 (0%)
Strand = Plus / Minus
Query: 1 gatctgcactagaggccgttctaccctatctttacagcctakkcttcgtcactgacctcc 60
|||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 3475 gatctgcactagaggccgttctaccc-agctttacagcctaggcttcgtcactgacctcc 3417
Query: 61 ttgtcctgcctactcgtcagggcatcatattaaccctgacggtggagtataggtaacacg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3416 acg-cctgcctactcgtcagggcatcatattaaccctgacggtggagtataggtaacacg 3358
Query: 121 cttgagcgccatccattttcagggctagttcattcggccggtgagttgttacacactcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3357 cttgagcgccatccattttcagggctagttcattcggccggtgagttgttacacactcct 3298
Query: 181 tagcggattccgacttccatggccaccgtccggctgtctagatgaactaacaccttttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3297 tagcggattccgacttccatggccaccgtccggctgtctagatgaactaacaccttttgt 3238
Query: 241 ggtgtctgatgagcgtgtattccggcaccttaactccacgttcggttcatcccgcatcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3237 ggtgtctgatgagcgtgtattccggcaccttaactccacgttcggttcatcccgcatcgc 3178
Query: 301 cagttctgcttaccaaaaatggcccactaaaagctcttcattcaaatgtccacgttcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3177 cagttctgcttaccaaaaatggcccactaaaagctcttcattcaaatgtccacgttcaat 3118
Query: 361 taagcaacaaggacttcttacatatttaaagtttgagaataggtcaaggtcatttcaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3117 taagcaacaaggacttcttacatatttaaagtttgagaataggtcaaggtcatttcaacc 3058
Query: 421 ccggtacctctaatcattcgctttacctcataaaactgatacgagcttctgctatcctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3057 ccggtacctctaatcattcgctttacctcataaaactgatacgagcttctgctatcctga 2998
Query: 481 gggaaacttcggcaggaaccagctactagatggttcgattagtctttcgcccctataccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2997 gggaaacttcggcaggaaccagctactagatggttcgattagtctttcgcccctataccc 2938
Query: 541 aaattcgacgatcgatttgcacgtcagaaccgctacgagcctccaccagagtttcctctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 aaattcgacgatcgatttgcacgtcagaaccgctacgagcctccaccagagtttcctctg 2878
Query: 601 gcttcaccctattcaggcatagttcaccatctttcgggtcccaacagctatgctcttact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2877 gcttcaccctattcaggcatagttcaccatctttcgggtcccaacagctatgctcttact 2818
Query: 661 caaatccatccgaagacatcaggatcggtcgatgatgcacccttgcgggccctcacctac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817 caaatccatccgaagacatcaggatcggtcgatgatgcacccttgcgggccctcacctac 2758
Query: 721 gttcactttcattacgcgtacgggttttacacccaaacactcgcatagacgttagactcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2757 gttcactttcattacgcgtacgggttttacacccaaacactcgcatagacgttagactcc 2698
Query: 781 ttggtccgtgtttcaagacgggcggcatttaacc 814
||||||||||||||||||||||||||||||||||
Sbjct: 2697 ttggtccgtgtttcaagacgggcggcatttaacc 2664
>3x_Contig130
Length = 115
Score = 147 bits (74), Expect = 3e-35
Identities = 81/82 (98%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 540 caaattcgacgatcgatttgcacgtcagaaccgctacgagcctccaccagagtttcctct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 caaattcgacgatcgatttgcacgtcagaaccgctacgagcctccaccagagtttcctct 29
Query: 600 ggcttcaccctattcaggcata 621
|||||||||||||||||||||
Sbjct: 28 -gcttcaccctattcaggcata 8
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3059
Number of Sequences: 1807
Number of extensions: 3059
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 2
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)